J6_8YUP_001
3D structure
- PDB id
- 8YUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 8YUP|1|a|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YUP|1|a|G|45
8YUP|1|a|G|46
*
8YUP|1|a|C|179
8YUP|1|a|G|180
8YUP|1|a|A|181
8YUP|1|a|A|182
8YUP|1|a|C|183
*
8YUP|1|a|G|214
8YUP|1|a|G|215
8YUP|1|a|A|216
8YUP|1|a|A|217
8YUP|1|a|A|218
8YUP|1|a|A|219
8YUP|1|a|G|220
8YUP|1|a|A|221
8YUP|1|a|A|222
8YUP|1|a|A|223
8YUP|1|a|U|224
*
8YUP|1|a|A|231
8YUP|1|a|G|232
8YUP|1|a|A|233
8YUP|1|a|U|234
8YUP|1|a|U|235
*
8YUP|1|a|A|262
8YUP|1|a|G|263
8YUP|1|a|C|264
8YUP|1|a|A|265
8YUP|1|a|G|266
*
8YUP|1|a|C|426
8YUP|1|a|U|427
8YUP|1|a|A|428
8YUP|1|a|A|429
8YUP|1|a|A|430
8YUP|1|a|U|431
8YUP|1|a|A|432
8YUP|1|a|C|433
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
Coloring options: