J6_8ZFF_001

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8ZFF|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFF|1|a|G|45
8ZFF|1|a|G|46
*
8ZFF|1|a|C|179
8ZFF|1|a|G|180
8ZFF|1|a|A|181
8ZFF|1|a|A|182
8ZFF|1|a|C|183
*
8ZFF|1|a|G|214
8ZFF|1|a|G|215
8ZFF|1|a|A|216
8ZFF|1|a|A|217
8ZFF|1|a|A|218
8ZFF|1|a|A|219
8ZFF|1|a|G|220
8ZFF|1|a|A|221
8ZFF|1|a|A|222
8ZFF|1|a|A|223
8ZFF|1|a|U|224
*
8ZFF|1|a|A|231
8ZFF|1|a|G|232
8ZFF|1|a|A|233
8ZFF|1|a|U|234
8ZFF|1|a|U|235
*
8ZFF|1|a|A|262
8ZFF|1|a|G|263
8ZFF|1|a|C|264
8ZFF|1|a|A|265
8ZFF|1|a|G|266
*
8ZFF|1|a|C|426
8ZFF|1|a|U|427
8ZFF|1|a|A|428
8ZFF|1|a|A|429
8ZFF|1|a|A|430
8ZFF|1|a|U|431
8ZFF|1|a|A|432
8ZFF|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34