3D structure

PDB id
9AX7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S initiation complex (tRNA-fMet M1 + CUG start codon)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
9AX7|1|a|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9AX7|1|a|G|45
9AX7|1|a|G|46
*
9AX7|1|a|C|179
9AX7|1|a|G|180
9AX7|1|a|A|181
9AX7|1|a|A|182
9AX7|1|a|C|183
*
9AX7|1|a|G|214
9AX7|1|a|G|215
9AX7|1|a|A|216
9AX7|1|a|A|217
9AX7|1|a|A|218
9AX7|1|a|A|219
9AX7|1|a|G|220
9AX7|1|a|A|221
9AX7|1|a|A|222
9AX7|1|a|A|223
9AX7|1|a|U|224
*
9AX7|1|a|A|231
9AX7|1|a|G|232
9AX7|1|a|A|233
9AX7|1|a|U|234
9AX7|1|a|U|235
*
9AX7|1|a|A|262
9AX7|1|a|G|263
9AX7|1|a|C|264
9AX7|1|a|A|265
9AX7|1|a|G|266
*
9AX7|1|a|C|426
9AX7|1|a|U|427
9AX7|1|a|A|428
9AX7|1|a|A|429
9AX7|1|a|A|430
9AX7|1|a|U|431
9AX7|1|a|A|432
9AX7|1|a|C|433

Current chains

Chain a
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L34

Coloring options:

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