J6_9AX8_003

3D structure

PDB id

9AX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9AX8|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AX8|1|A|G|45
9AX8|1|A|G|46
*
9AX8|1|A|C|179
9AX8|1|A|G|180
9AX8|1|A|A|181
9AX8|1|A|A|182
9AX8|1|A|C|183
*
9AX8|1|A|G|214
9AX8|1|A|G|215
9AX8|1|A|A|216
9AX8|1|A|A|217
9AX8|1|A|A|218
9AX8|1|A|A|219
9AX8|1|A|G|220
9AX8|1|A|A|221
9AX8|1|A|A|222
9AX8|1|A|A|223
9AX8|1|A|U|224
*
9AX8|1|A|A|231
9AX8|1|A|G|232
9AX8|1|A|A|233
9AX8|1|A|U|234
9AX8|1|A|U|235
*
9AX8|1|A|A|262
9AX8|1|A|G|263
9AX8|1|A|C|264
9AX8|1|A|A|265
9AX8|1|A|G|266
*
9AX8|1|A|C|426
9AX8|1|A|U|427
9AX8|1|A|A|428
9AX8|1|A|A|429
9AX8|1|A|A|430
9AX8|1|A|U|431
9AX8|1|A|A|432
9AX8|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 7

50S ribosomal protein L34