J6_9B51_001

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9B51|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B51|1|BA|G|45
9B51|1|BA|G|46
*
9B51|1|BA|C|179
9B51|1|BA|G|180
9B51|1|BA|A|181
9B51|1|BA|A|182
9B51|1|BA|C|183
*
9B51|1|BA|G|214
9B51|1|BA|G|215
9B51|1|BA|A|216
9B51|1|BA|A|217
9B51|1|BA|A|218
9B51|1|BA|A|219
9B51|1|BA|G|220
9B51|1|BA|A|221
9B51|1|BA|A|222
9B51|1|BA|A|223
9B51|1|BA|U|224
*
9B51|1|BA|A|231
9B51|1|BA|G|232
9B51|1|BA|A|233
9B51|1|BA|U|234
9B51|1|BA|U|235
*
9B51|1|BA|A|262
9B51|1|BA|G|263
9B51|1|BA|C|264
9B51|1|BA|A|265
9B51|1|BA|G|266
*
9B51|1|BA|C|426
9B51|1|BA|U|427
9B51|1|BA|A|428
9B51|1|BA|A|429
9B51|1|BA|A|430
9B51|1|BA|U|431
9B51|1|BA|A|432
9B51|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34