J6_9BS0_001
3D structure
- PDB id
- 9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- YphC-treated 45SYphC particle. Class 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GC*GCAGAC*GGAAGAGAAAG*CGAUU*AUCAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 9BS0|1|A|G|184, 9BS0|1|A|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BS0|1|A|G|45
9BS0|1|A|C|46
*
9BS0|1|A|G|181
9BS0|1|A|C|182
9BS0|1|A|A|183
9BS0|1|A|G|184
9BS0|1|A|A|185
9BS0|1|A|C|186
*
9BS0|1|A|G|217
9BS0|1|A|G|218
9BS0|1|A|A|219
9BS0|1|A|A|220
9BS0|1|A|G|221
9BS0|1|A|A|222
9BS0|1|A|G|223
9BS0|1|A|A|224
9BS0|1|A|A|225
9BS0|1|A|A|226
9BS0|1|A|G|227
*
9BS0|1|A|C|234
9BS0|1|A|G|235
9BS0|1|A|A|236
9BS0|1|A|U|237
9BS0|1|A|U|238
*
9BS0|1|A|A|265
9BS0|1|A|U|266
9BS0|1|A|C|267
9BS0|1|A|A|268
9BS0|1|A|G|269
*
9BS0|1|A|C|473
9BS0|1|A|U|474
9BS0|1|A|A|475
9BS0|1|A|A|476
9BS0|1|A|A|477
9BS0|1|A|U|478
9BS0|1|A|A|479
9BS0|1|A|C|480
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL4
- Chain U
- Large ribosomal subunit protein bL34
Coloring options: