J6_9EBB_001

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9EBB|1|I|A|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|G|45
9EBB|1|I|C|46
*
9EBB|1|I|G|181
9EBB|1|I|G|182
9EBB|1|I|A|183
9EBB|1|I|A|184
9EBB|1|I|C|185
*
9EBB|1|I|G|216
9EBB|1|I|G|217
9EBB|1|I|A|218
9EBB|1|I|G|219
9EBB|1|I|G|220
9EBB|1|I|A|221
9EBB|1|I|G|222
9EBB|1|I|A|223
9EBB|1|I|A|224
9EBB|1|I|A|225
9EBB|1|I|A|226
*
9EBB|1|I|U|233
9EBB|1|I|G|234
9EBB|1|I|A|235
9EBB|1|I|U|236
9EBB|1|I|U|237
*
9EBB|1|I|A|264
9EBB|1|I|A|265
9EBB|1|I|C|266
9EBB|1|I|A|267
9EBB|1|I|G|268
*
9EBB|1|I|C|515
9EBB|1|I|U|516
9EBB|1|I|A|517
9EBB|1|I|A|518
9EBB|1|I|A|519
9EBB|1|I|U|520
9EBB|1|I|A|521
9EBB|1|I|C|522

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein bL34