J6_9EC3_001

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9EC3|1|I|A|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|I|G|45
9EC3|1|I|C|46
*
9EC3|1|I|G|181
9EC3|1|I|G|182
9EC3|1|I|A|183
9EC3|1|I|A|184
9EC3|1|I|C|185
*
9EC3|1|I|G|216
9EC3|1|I|G|217
9EC3|1|I|A|218
9EC3|1|I|G|219
9EC3|1|I|G|220
9EC3|1|I|A|221
9EC3|1|I|G|222
9EC3|1|I|A|223
9EC3|1|I|A|224
9EC3|1|I|A|225
9EC3|1|I|A|226
*
9EC3|1|I|U|233
9EC3|1|I|G|234
9EC3|1|I|A|235
9EC3|1|I|U|236
9EC3|1|I|U|237
*
9EC3|1|I|A|264
9EC3|1|I|A|265
9EC3|1|I|C|266
9EC3|1|I|A|267
9EC3|1|I|G|268
*
9EC3|1|I|C|515
9EC3|1|I|U|516
9EC3|1|I|A|517
9EC3|1|I|A|518
9EC3|1|I|A|519
9EC3|1|I|U|520
9EC3|1|I|A|521
9EC3|1|I|C|522

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein bL34