J6_9FBV_001

3D structure

PDB id

9FBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Escherichia coli ribosome with P-site initiatior tRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9FBV|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FBV|1|a|G|45
9FBV|1|a|G|46
*
9FBV|1|a|C|179
9FBV|1|a|G|180
9FBV|1|a|A|181
9FBV|1|a|A|182
9FBV|1|a|C|183
*
9FBV|1|a|G|214
9FBV|1|a|G|215
9FBV|1|a|A|216
9FBV|1|a|A|217
9FBV|1|a|A|218
9FBV|1|a|A|219
9FBV|1|a|G|220
9FBV|1|a|A|221
9FBV|1|a|A|222
9FBV|1|a|A|223
9FBV|1|a|U|224
*
9FBV|1|a|A|231
9FBV|1|a|G|232
9FBV|1|a|A|233
9FBV|1|a|U|234
9FBV|1|a|U|235
*
9FBV|1|a|A|262
9FBV|1|a|G|263
9FBV|1|a|C|264
9FBV|1|a|A|265
9FBV|1|a|G|266
*
9FBV|1|a|C|426
9FBV|1|a|U|427
9FBV|1|a|A|428
9FBV|1|a|A|429
9FBV|1|a|A|430
9FBV|1|a|U|431
9FBV|1|a|A|432
9FBV|1|a|C|433

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34