J6_9GHA_001

3D structure

PDB id

9GHA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9GHA|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHA|1|a|G|45
9GHA|1|a|G|46
*
9GHA|1|a|C|179
9GHA|1|a|G|180
9GHA|1|a|A|181
9GHA|1|a|A|182
9GHA|1|a|C|183
*
9GHA|1|a|G|214
9GHA|1|a|G|215
9GHA|1|a|A|216
9GHA|1|a|A|217
9GHA|1|a|A|218
9GHA|1|a|A|219
9GHA|1|a|G|220
9GHA|1|a|A|221
9GHA|1|a|A|222
9GHA|1|a|A|223
9GHA|1|a|U|224
*
9GHA|1|a|A|231
9GHA|1|a|G|232
9GHA|1|a|A|233
9GHA|1|a|U|234
9GHA|1|a|U|235
*
9GHA|1|a|A|262
9GHA|1|a|G|263
9GHA|1|a|C|264
9GHA|1|a|A|265
9GHA|1|a|G|266
*
9GHA|1|a|C|426
9GHA|1|a|U|427
9GHA|1|a|A|428
9GHA|1|a|A|429
9GHA|1|a|A|430
9GHA|1|a|U|431
9GHA|1|a|A|432
9GHA|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34