J6_9GHE_001

3D structure

PDB id

9GHE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9GHE|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHE|1|a|G|45
9GHE|1|a|G|46
*
9GHE|1|a|C|179
9GHE|1|a|G|180
9GHE|1|a|A|181
9GHE|1|a|A|182
9GHE|1|a|C|183
*
9GHE|1|a|G|214
9GHE|1|a|G|215
9GHE|1|a|A|216
9GHE|1|a|A|217
9GHE|1|a|A|218
9GHE|1|a|A|219
9GHE|1|a|G|220
9GHE|1|a|A|221
9GHE|1|a|A|222
9GHE|1|a|A|223
9GHE|1|a|U|224
*
9GHE|1|a|A|231
9GHE|1|a|G|232
9GHE|1|a|A|233
9GHE|1|a|U|234
9GHE|1|a|U|235
*
9GHE|1|a|A|262
9GHE|1|a|G|263
9GHE|1|a|C|264
9GHE|1|a|A|265
9GHE|1|a|G|266
*
9GHE|1|a|C|426
9GHE|1|a|U|427
9GHE|1|a|A|428
9GHE|1|a|A|429
9GHE|1|a|A|430
9GHE|1|a|U|431
9GHE|1|a|A|432
9GHE|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34