J6_9GR1_001

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9GR1|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GR1|1|a|G|45
9GR1|1|a|G|46
*
9GR1|1|a|C|179
9GR1|1|a|G|180
9GR1|1|a|A|181
9GR1|1|a|A|182
9GR1|1|a|C|183
*
9GR1|1|a|G|214
9GR1|1|a|G|215
9GR1|1|a|A|216
9GR1|1|a|A|217
9GR1|1|a|A|218
9GR1|1|a|A|219
9GR1|1|a|G|220
9GR1|1|a|A|221
9GR1|1|a|A|222
9GR1|1|a|A|223
9GR1|1|a|U|224
*
9GR1|1|a|A|231
9GR1|1|a|G|232
9GR1|1|a|A|233
9GR1|1|a|U|234
9GR1|1|a|U|235
*
9GR1|1|a|A|262
9GR1|1|a|G|263
9GR1|1|a|C|264
9GR1|1|a|A|265
9GR1|1|a|G|266
*
9GR1|1|a|C|426
9GR1|1|a|U|427
9GR1|1|a|A|428
9GR1|1|a|A|429
9GR1|1|a|A|430
9GR1|1|a|U|431
9GR1|1|a|A|432
9GR1|1|a|C|433

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34