J6_9H0L_001

3D structure

PDB id

9H0L (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with cognate tRNASer3 bound to A-site AGC codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H0L|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H0L|1|a|G|45
9H0L|1|a|G|46
*
9H0L|1|a|C|179
9H0L|1|a|G|180
9H0L|1|a|A|181
9H0L|1|a|A|182
9H0L|1|a|C|183
*
9H0L|1|a|G|214
9H0L|1|a|G|215
9H0L|1|a|A|216
9H0L|1|a|A|217
9H0L|1|a|A|218
9H0L|1|a|A|219
9H0L|1|a|G|220
9H0L|1|a|A|221
9H0L|1|a|A|222
9H0L|1|a|A|223
9H0L|1|a|U|224
*
9H0L|1|a|A|231
9H0L|1|a|G|232
9H0L|1|a|A|233
9H0L|1|a|U|234
9H0L|1|a|U|235
*
9H0L|1|a|A|262
9H0L|1|a|G|263
9H0L|1|a|C|264
9H0L|1|a|A|265
9H0L|1|a|G|266
*
9H0L|1|a|C|426
9H0L|1|a|U|427
9H0L|1|a|A|428
9H0L|1|a|A|429
9H0L|1|a|A|430
9H0L|1|a|U|431
9H0L|1|a|A|432
9H0L|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34