J6_9H3M_001

3D structure

PDB id

9H3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

4.41 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

9H3M|1|A|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3M|1|A|G|45
9H3M|1|A|G|46
*
9H3M|1|A|C|179
9H3M|1|A|G|180
9H3M|1|A|A|181
9H3M|1|A|A|182
9H3M|1|A|C|183
*
9H3M|1|A|G|215
9H3M|1|A|A|216
9H3M|1|A|A|217
9H3M|1|A|A|218
9H3M|1|A|A|219
9H3M|1|A|G|220
9H3M|1|A|A|221
9H3M|1|A|A|222
9H3M|1|A|A|223
9H3M|1|A|U|224
*
9H3M|1|A|A|231
9H3M|1|A|G|232
9H3M|1|A|A|233
9H3M|1|A|U|234
9H3M|1|A|U|235
*
9H3M|1|A|A|262
9H3M|1|A|G|263
9H3M|1|A|C|264
9H3M|1|A|A|265
9H3M|1|A|G|266
*
9H3M|1|A|C|426
9H3M|1|A|U|427
9H3M|1|A|A|428
9H3M|1|A|A|429
9H3M|1|A|A|430
9H3M|1|A|U|431
9H3M|1|A|A|432
9H3M|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34