J6_9H3N_001

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

9H3N|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3N|1|A|G|45
9H3N|1|A|G|46
*
9H3N|1|A|C|179
9H3N|1|A|G|180
9H3N|1|A|A|181
9H3N|1|A|A|182
9H3N|1|A|C|183
*
9H3N|1|A|G|215
9H3N|1|A|A|216
9H3N|1|A|A|217
9H3N|1|A|A|218
9H3N|1|A|A|219
9H3N|1|A|G|220
9H3N|1|A|A|221
9H3N|1|A|A|222
9H3N|1|A|A|223
9H3N|1|A|U|224
*
9H3N|1|A|A|231
9H3N|1|A|G|232
9H3N|1|A|A|233
9H3N|1|A|U|234
9H3N|1|A|U|235
*
9H3N|1|A|A|262
9H3N|1|A|G|263
9H3N|1|A|C|264
9H3N|1|A|A|265
9H3N|1|A|G|266
*
9H3N|1|A|C|426
9H3N|1|A|U|427
9H3N|1|A|A|428
9H3N|1|A|A|429
9H3N|1|A|A|430
9H3N|1|A|U|431
9H3N|1|A|A|432
9H3N|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34