J6_9H3R_001

3D structure

PDB id

9H3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

4.12 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3R|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3R|1|A|G|45
9H3R|1|A|G|46
*
9H3R|1|A|C|179
9H3R|1|A|G|180
9H3R|1|A|A|181
9H3R|1|A|A|182
9H3R|1|A|C|183
*
9H3R|1|A|G|214
9H3R|1|A|G|215
9H3R|1|A|A|216
9H3R|1|A|A|217
9H3R|1|A|A|218
9H3R|1|A|A|219
9H3R|1|A|G|220
9H3R|1|A|A|221
9H3R|1|A|A|222
9H3R|1|A|A|223
9H3R|1|A|U|224
*
9H3R|1|A|A|231
9H3R|1|A|G|232
9H3R|1|A|A|233
9H3R|1|A|U|234
9H3R|1|A|U|235
*
9H3R|1|A|A|262
9H3R|1|A|G|263
9H3R|1|A|C|264
9H3R|1|A|A|265
9H3R|1|A|G|266
*
9H3R|1|A|C|426
9H3R|1|A|U|427
9H3R|1|A|A|428
9H3R|1|A|A|429
9H3R|1|A|A|430
9H3R|1|A|U|431
9H3R|1|A|A|432
9H3R|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34