J6_9H3T_001

3D structure

PDB id

9H3T (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_L2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.85 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3T|1|A|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3T|1|A|G|45
9H3T|1|A|G|46
*
9H3T|1|A|C|179
9H3T|1|A|G|180
9H3T|1|A|A|181
9H3T|1|A|A|182
9H3T|1|A|C|183
*
9H3T|1|A|G|214
9H3T|1|A|G|215
9H3T|1|A|A|216
9H3T|1|A|A|217
9H3T|1|A|A|218
9H3T|1|A|A|219
9H3T|1|A|G|220
9H3T|1|A|A|221
9H3T|1|A|A|222
9H3T|1|A|A|223
9H3T|1|A|U|224
*
9H3T|1|A|A|231
9H3T|1|A|G|232
9H3T|1|A|A|233
9H3T|1|A|U|234
9H3T|1|A|U|235
*
9H3T|1|A|A|262
9H3T|1|A|G|263
9H3T|1|A|C|264
9H3T|1|A|A|265
9H3T|1|A|G|266
*
9H3T|1|A|C|426
9H3T|1|A|U|427
9H3T|1|A|A|428
9H3T|1|A|A|429
9H3T|1|A|A|430
9H3T|1|A|U|431
9H3T|1|A|A|432
9H3T|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34