J6_9H3U_001

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3U|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3U|1|A|G|45
9H3U|1|A|G|46
*
9H3U|1|A|C|179
9H3U|1|A|G|180
9H3U|1|A|A|181
9H3U|1|A|A|182
9H3U|1|A|C|183
*
9H3U|1|A|G|214
9H3U|1|A|G|215
9H3U|1|A|A|216
9H3U|1|A|A|217
9H3U|1|A|A|218
9H3U|1|A|A|219
9H3U|1|A|G|220
9H3U|1|A|A|221
9H3U|1|A|A|222
9H3U|1|A|A|223
9H3U|1|A|U|224
*
9H3U|1|A|A|231
9H3U|1|A|G|232
9H3U|1|A|A|233
9H3U|1|A|U|234
9H3U|1|A|U|235
*
9H3U|1|A|A|262
9H3U|1|A|G|263
9H3U|1|A|C|264
9H3U|1|A|A|265
9H3U|1|A|G|266
*
9H3U|1|A|C|426
9H3U|1|A|U|427
9H3U|1|A|A|428
9H3U|1|A|A|429
9H3U|1|A|A|430
9H3U|1|A|U|431
9H3U|1|A|A|432
9H3U|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34