J6_9H3V_001

3D structure

PDB id

9H3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_L2-L28

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3V|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3V|1|A|G|45
9H3V|1|A|G|46
*
9H3V|1|A|C|179
9H3V|1|A|G|180
9H3V|1|A|A|181
9H3V|1|A|A|182
9H3V|1|A|C|183
*
9H3V|1|A|G|214
9H3V|1|A|G|215
9H3V|1|A|A|216
9H3V|1|A|A|217
9H3V|1|A|A|218
9H3V|1|A|A|219
9H3V|1|A|G|220
9H3V|1|A|A|221
9H3V|1|A|A|222
9H3V|1|A|A|223
9H3V|1|A|U|224
*
9H3V|1|A|A|231
9H3V|1|A|G|232
9H3V|1|A|A|233
9H3V|1|A|U|234
9H3V|1|A|U|235
*
9H3V|1|A|A|262
9H3V|1|A|G|263
9H3V|1|A|C|264
9H3V|1|A|A|265
9H3V|1|A|G|266
*
9H3V|1|A|C|426
9H3V|1|A|U|427
9H3V|1|A|A|428
9H3V|1|A|A|429
9H3V|1|A|A|430
9H3V|1|A|U|431
9H3V|1|A|A|432
9H3V|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34