J6_9H3Z_001

3D structure

PDB id

9H3Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3Z|1|A|A|223, 9H3Z|1|A|C|264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3Z|1|A|G|45
9H3Z|1|A|G|46
*
9H3Z|1|A|C|179
9H3Z|1|A|G|180
9H3Z|1|A|A|181
9H3Z|1|A|A|182
9H3Z|1|A|C|183
*
9H3Z|1|A|G|214
9H3Z|1|A|G|215
9H3Z|1|A|A|216
9H3Z|1|A|A|217
9H3Z|1|A|A|218
9H3Z|1|A|A|219
9H3Z|1|A|G|220
9H3Z|1|A|A|221
9H3Z|1|A|A|222
9H3Z|1|A|A|223
9H3Z|1|A|U|224
*
9H3Z|1|A|A|231
9H3Z|1|A|G|232
9H3Z|1|A|A|233
9H3Z|1|A|U|234
9H3Z|1|A|U|235
*
9H3Z|1|A|A|262
9H3Z|1|A|G|263
9H3Z|1|A|C|264
9H3Z|1|A|A|265
9H3Z|1|A|G|266
*
9H3Z|1|A|C|426
9H3Z|1|A|U|427
9H3Z|1|A|A|428
9H3Z|1|A|A|429
9H3Z|1|A|A|430
9H3Z|1|A|U|431
9H3Z|1|A|A|432
9H3Z|1|A|C|433

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34