J6_9HA2_001

3D structure

PDB id

9HA2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

9HA2|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA2|1|A|G|45
9HA2|1|A|G|46
*
9HA2|1|A|C|179
9HA2|1|A|G|180
9HA2|1|A|A|181
9HA2|1|A|A|182
9HA2|1|A|C|183
*
9HA2|1|A|G|215
9HA2|1|A|A|216
9HA2|1|A|A|217
9HA2|1|A|A|218
9HA2|1|A|A|219
9HA2|1|A|G|220
9HA2|1|A|A|221
9HA2|1|A|A|222
9HA2|1|A|A|223
9HA2|1|A|U|224
*
9HA2|1|A|A|231
9HA2|1|A|G|232
9HA2|1|A|A|233
9HA2|1|A|U|234
9HA2|1|A|U|235
*
9HA2|1|A|A|262
9HA2|1|A|G|263
9HA2|1|A|C|264
9HA2|1|A|A|265
9HA2|1|A|G|266
*
9HA2|1|A|C|426
9HA2|1|A|U|427
9HA2|1|A|A|428
9HA2|1|A|A|429
9HA2|1|A|A|430
9HA2|1|A|U|431
9HA2|1|A|A|432
9HA2|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34