J6_9HA3_001

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

9HA3|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA3|1|A|G|45
9HA3|1|A|G|46
*
9HA3|1|A|C|179
9HA3|1|A|G|180
9HA3|1|A|A|181
9HA3|1|A|A|182
9HA3|1|A|C|183
*
9HA3|1|A|G|215
9HA3|1|A|A|216
9HA3|1|A|A|217
9HA3|1|A|A|218
9HA3|1|A|A|219
9HA3|1|A|G|220
9HA3|1|A|A|221
9HA3|1|A|A|222
9HA3|1|A|A|223
9HA3|1|A|U|224
*
9HA3|1|A|A|231
9HA3|1|A|G|232
9HA3|1|A|A|233
9HA3|1|A|U|234
9HA3|1|A|U|235
*
9HA3|1|A|A|262
9HA3|1|A|G|263
9HA3|1|A|C|264
9HA3|1|A|A|265
9HA3|1|A|G|266
*
9HA3|1|A|C|426
9HA3|1|A|U|427
9HA3|1|A|A|428
9HA3|1|A|A|429
9HA3|1|A|A|430
9HA3|1|A|U|431
9HA3|1|A|A|432
9HA3|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34