J6_9HA5_001

3D structure

PDB id

9HA5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_L2 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9HA5|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA5|1|A|G|45
9HA5|1|A|G|46
*
9HA5|1|A|C|179
9HA5|1|A|G|180
9HA5|1|A|A|181
9HA5|1|A|A|182
9HA5|1|A|C|183
*
9HA5|1|A|G|214
9HA5|1|A|G|215
9HA5|1|A|A|216
9HA5|1|A|A|217
9HA5|1|A|A|218
9HA5|1|A|A|219
9HA5|1|A|G|220
9HA5|1|A|A|221
9HA5|1|A|A|222
9HA5|1|A|A|223
9HA5|1|A|U|224
*
9HA5|1|A|A|231
9HA5|1|A|G|232
9HA5|1|A|A|233
9HA5|1|A|U|234
9HA5|1|A|U|235
*
9HA5|1|A|A|262
9HA5|1|A|G|263
9HA5|1|A|C|264
9HA5|1|A|A|265
9HA5|1|A|G|266
*
9HA5|1|A|C|426
9HA5|1|A|U|427
9HA5|1|A|A|428
9HA5|1|A|A|429
9HA5|1|A|A|430
9HA5|1|A|U|431
9HA5|1|A|A|432
9HA5|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34