J6_9HA7_001

3D structure

PDB id

9HA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.37 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

9HA7|1|A|A|223, 9HA7|1|A|C|264

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA7|1|A|G|45
9HA7|1|A|G|46
*
9HA7|1|A|C|179
9HA7|1|A|G|180
9HA7|1|A|A|181
9HA7|1|A|A|182
9HA7|1|A|C|183
*
9HA7|1|A|G|214
9HA7|1|A|G|215
9HA7|1|A|A|216
9HA7|1|A|A|217
9HA7|1|A|A|218
9HA7|1|A|A|219
9HA7|1|A|G|220
9HA7|1|A|A|221
9HA7|1|A|A|222
9HA7|1|A|A|223
9HA7|1|A|U|224
9HA7|1|A|C|225
*
9HA7|1|A|G|230
9HA7|1|A|A|231
9HA7|1|A|G|232
9HA7|1|A|A|233
9HA7|1|A|U|234
9HA7|1|A|U|235
*
9HA7|1|A|A|262
9HA7|1|A|G|263
9HA7|1|A|C|264
9HA7|1|A|A|265
9HA7|1|A|G|266
*
9HA7|1|A|C|426
9HA7|1|A|U|427
9HA7|1|A|A|428
9HA7|1|A|A|429
9HA7|1|A|A|430
9HA7|1|A|U|431
9HA7|1|A|A|432
9HA7|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34