J6_9HAI_001

3D structure

PDB id

9HAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9HAI|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAI|1|A|G|45
9HAI|1|A|G|46
*
9HAI|1|A|C|179
9HAI|1|A|G|180
9HAI|1|A|A|181
9HAI|1|A|A|182
9HAI|1|A|C|183
*
9HAI|1|A|G|214
9HAI|1|A|G|215
9HAI|1|A|A|216
9HAI|1|A|A|217
9HAI|1|A|A|218
9HAI|1|A|A|219
9HAI|1|A|G|220
9HAI|1|A|A|221
9HAI|1|A|A|222
9HAI|1|A|A|223
9HAI|1|A|U|224
*
9HAI|1|A|A|231
9HAI|1|A|G|232
9HAI|1|A|A|233
9HAI|1|A|U|234
9HAI|1|A|U|235
*
9HAI|1|A|A|262
9HAI|1|A|G|263
9HAI|1|A|C|264
9HAI|1|A|A|265
9HAI|1|A|G|266
*
9HAI|1|A|C|426
9HAI|1|A|U|427
9HAI|1|A|A|428
9HAI|1|A|A|429
9HAI|1|A|A|430
9HAI|1|A|U|431
9HAI|1|A|A|432
9HAI|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34