J6_9HY6_001
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GG*CGAACC*GAGGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 39 nucleotides
- Bulged bases
- 9HY6|1|b|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HY6|1|b|G|45
9HY6|1|b|G|46
*
9HY6|1|b|C|179
9HY6|1|b|G|180
9HY6|1|b|A|181
9HY6|1|b|A|182
9HY6|1|b|C|183
9HY6|1|b|C|184
*
9HY6|1|b|G|212
9HY6|1|b|A|213
9HY6|1|b|G|214
9HY6|1|b|G|215
9HY6|1|b|A|216
9HY6|1|b|A|217
9HY6|1|b|A|218
9HY6|1|b|A|219
9HY6|1|b|G|220
9HY6|1|b|A|221
9HY6|1|b|A|222
9HY6|1|b|A|223
9HY6|1|b|U|224
*
9HY6|1|b|A|231
9HY6|1|b|G|232
9HY6|1|b|A|233
9HY6|1|b|U|234
9HY6|1|b|U|235
*
9HY6|1|b|A|262
9HY6|1|b|G|263
9HY6|1|b|C|264
9HY6|1|b|A|265
9HY6|1|b|G|266
*
9HY6|1|b|C|426
9HY6|1|b|U|427
9HY6|1|b|A|428
9HY6|1|b|A|429
9HY6|1|b|A|430
9HY6|1|b|U|431
9HY6|1|b|A|432
9HY6|1|b|C|433
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 6
- Large ribosomal subunit protein bL34
Coloring options: