J6_9J1M_001

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9J1M|1|A|A|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|A|G|45
9J1M|1|A|C|46
*
9J1M|1|A|G|181
9J1M|1|A|G|182
9J1M|1|A|A|183
9J1M|1|A|A|184
9J1M|1|A|C|185
*
9J1M|1|A|G|216
9J1M|1|A|G|217
9J1M|1|A|A|218
9J1M|1|A|G|219
9J1M|1|A|G|220
9J1M|1|A|A|221
9J1M|1|A|G|222
9J1M|1|A|A|223
9J1M|1|A|A|224
9J1M|1|A|A|225
9J1M|1|A|A|226
*
9J1M|1|A|U|233
9J1M|1|A|G|234
9J1M|1|A|A|235
9J1M|1|A|U|236
9J1M|1|A|U|237
*
9J1M|1|A|A|264
9J1M|1|A|A|265
9J1M|1|A|C|266
9J1M|1|A|A|267
9J1M|1|A|G|268
*
9J1M|1|A|C|515
9J1M|1|A|U|516
9J1M|1|A|A|517
9J1M|1|A|A|518
9J1M|1|A|A|519
9J1M|1|A|U|520
9J1M|1|A|A|521
9J1M|1|A|C|522

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34