J6_9JPM_001

3D structure

PDB id

9JPM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9JPM|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPM|1|a|G|45
9JPM|1|a|G|46
*
9JPM|1|a|C|179
9JPM|1|a|G|180
9JPM|1|a|A|181
9JPM|1|a|A|182
9JPM|1|a|C|183
*
9JPM|1|a|G|214
9JPM|1|a|G|215
9JPM|1|a|A|216
9JPM|1|a|A|217
9JPM|1|a|A|218
9JPM|1|a|A|219
9JPM|1|a|G|220
9JPM|1|a|A|221
9JPM|1|a|A|222
9JPM|1|a|A|223
9JPM|1|a|U|224
*
9JPM|1|a|A|231
9JPM|1|a|G|232
9JPM|1|a|A|233
9JPM|1|a|U|234
9JPM|1|a|U|235
*
9JPM|1|a|A|262
9JPM|1|a|G|263
9JPM|1|a|C|264
9JPM|1|a|A|265
9JPM|1|a|G|266
*
9JPM|1|a|C|426
9JPM|1|a|U|427
9JPM|1|a|A|428
9JPM|1|a|A|429
9JPM|1|a|A|430
9JPM|1|a|U|431
9JPM|1|a|A|432
9JPM|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34