J6_9JQ2_001

3D structure

PDB id

9JQ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.61 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9JQ2|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JQ2|1|a|G|45
9JQ2|1|a|G|46
*
9JQ2|1|a|C|179
9JQ2|1|a|G|180
9JQ2|1|a|A|181
9JQ2|1|a|A|182
9JQ2|1|a|C|183
*
9JQ2|1|a|G|214
9JQ2|1|a|G|215
9JQ2|1|a|A|216
9JQ2|1|a|A|217
9JQ2|1|a|A|218
9JQ2|1|a|A|219
9JQ2|1|a|G|220
9JQ2|1|a|A|221
9JQ2|1|a|A|222
9JQ2|1|a|A|223
9JQ2|1|a|U|224
*
9JQ2|1|a|A|231
9JQ2|1|a|G|232
9JQ2|1|a|A|233
9JQ2|1|a|U|234
9JQ2|1|a|U|235
*
9JQ2|1|a|A|262
9JQ2|1|a|G|263
9JQ2|1|a|C|264
9JQ2|1|a|A|265
9JQ2|1|a|G|266
*
9JQ2|1|a|C|426
9JQ2|1|a|U|427
9JQ2|1|a|A|428
9JQ2|1|a|A|429
9JQ2|1|a|A|430
9JQ2|1|a|U|431
9JQ2|1|a|A|432
9JQ2|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34