J6_9JSR_001

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

9JSR|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|G|45
9JSR|1|A|G|46
*
9JSR|1|A|C|179
9JSR|1|A|G|180
9JSR|1|A|A|181
9JSR|1|A|A|182
9JSR|1|A|C|183
*
9JSR|1|A|G|214
9JSR|1|A|G|215
9JSR|1|A|A|216
9JSR|1|A|A|217
9JSR|1|A|A|218
9JSR|1|A|A|219
9JSR|1|A|G|220
9JSR|1|A|A|221
9JSR|1|A|A|222
9JSR|1|A|A|223
9JSR|1|A|U|224
9JSR|1|A|C|225
*
9JSR|1|A|G|230
9JSR|1|A|A|231
9JSR|1|A|G|232
9JSR|1|A|A|233
9JSR|1|A|U|234
9JSR|1|A|U|235
*
9JSR|1|A|A|262
9JSR|1|A|G|263
9JSR|1|A|C|264
9JSR|1|A|A|265
9JSR|1|A|G|266
*
9JSR|1|A|C|426
9JSR|1|A|U|427
9JSR|1|A|A|428
9JSR|1|A|A|429
9JSR|1|A|A|430
9JSR|1|A|U|431
9JSR|1|A|A|432
9JSR|1|A|C|433

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34