J6_9MNC_002
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 9MNC|1|L5|C|1501, 9MNC|1|L5|G|1502
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L5|C|1352
9MNC|1|L5|G|1353
9MNC|1|L5|A|1354
9MNC|1|L5|G|1355
*
9MNC|1|L5|C|1384
9MNC|1|L5|G|1385
9MNC|1|L5|C|1386
9MNC|1|L5|A|1387
9MNC|1|L5|A|1388
*
9MNC|1|L5|U|1395
9MNC|1|L5|G|1396
9MNC|1|L5|A|1397
9MNC|1|L5|A|1398
9MNC|1|L5|G|1399
*
9MNC|1|L5|C|1418
9MNC|1|L5|G|1419
9MNC|1|L5|A|1420
9MNC|1|L5|G|1421
*
9MNC|1|L5|C|1464
9MNC|1|L5|G|1465
9MNC|1|L5|G|1466
*
9MNC|1|L5|C|1499
9MNC|1|L5|A|1500
9MNC|1|L5|C|1501
9MNC|1|L5|G|1502
9MNC|1|L5|A|1503
9MNC|1|L5|G|1504
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LQ
- Large ribosomal subunit protein eL13
- Chain La
- Large ribosomal subunit protein uL15
- Chain Lb
- Large ribosomal subunit protein eL29
- Chain Li
- Large ribosomal subunit protein eL36
- Chain Lj
- Large ribosomal subunit protein eL18
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