3D structure

PDB id
9MOR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
9MOR|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MOR|1|1|G|45
9MOR|1|1|G|46
*
9MOR|1|1|C|179
9MOR|1|1|G|180
9MOR|1|1|A|181
9MOR|1|1|A|182
9MOR|1|1|C|183
*
9MOR|1|1|G|214
9MOR|1|1|G|215
9MOR|1|1|A|216
9MOR|1|1|A|217
9MOR|1|1|A|218
9MOR|1|1|A|219
9MOR|1|1|G|220
9MOR|1|1|A|221
9MOR|1|1|A|222
9MOR|1|1|A|223
9MOR|1|1|U|224
*
9MOR|1|1|A|231
9MOR|1|1|G|232
9MOR|1|1|A|233
9MOR|1|1|U|234
9MOR|1|1|U|235
*
9MOR|1|1|A|262
9MOR|1|1|G|263
9MOR|1|1|C|264
9MOR|1|1|A|265
9MOR|1|1|G|266
*
9MOR|1|1|C|426
9MOR|1|1|U|427
9MOR|1|1|A|428
9MOR|1|1|A|429
9MOR|1|1|A|430
9MOR|1|1|U|431
9MOR|1|1|A|432
9MOR|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain d
50S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1743 s