J6_9N2B_001
3D structure
- PDB id
- 9N2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 9N2B|1|23|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9N2B|1|23|G|45
9N2B|1|23|G|46
*
9N2B|1|23|C|179
9N2B|1|23|G|180
9N2B|1|23|A|181
9N2B|1|23|A|182
9N2B|1|23|C|183
*
9N2B|1|23|G|214
9N2B|1|23|G|215
9N2B|1|23|A|216
9N2B|1|23|A|217
9N2B|1|23|A|218
9N2B|1|23|A|219
9N2B|1|23|G|220
9N2B|1|23|A|221
9N2B|1|23|A|222
9N2B|1|23|A|223
9N2B|1|23|U|224
*
9N2B|1|23|A|231
9N2B|1|23|G|232
9N2B|1|23|A|233
9N2B|1|23|U|234
9N2B|1|23|U|235
*
9N2B|1|23|A|262
9N2B|1|23|G|263
9N2B|1|23|C|264
9N2B|1|23|A|265
9N2B|1|23|G|266
*
9N2B|1|23|C|426
9N2B|1|23|U|427
9N2B|1|23|A|428
9N2B|1|23|A|429
9N2B|1|23|A|430
9N2B|1|23|U|431
9N2B|1|23|A|432
9N2B|1|23|C|433
Current chains
- Chain 23
- 23S ribosomal RNA (rRNA) from the rrnB operon
Nearby chains
- Chain Lh
- 50S ribosomal protein L34
Coloring options: