J6_9O3H_003

3D structure

PDB id

9O3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

9O3H|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3H|1|2A|G|44
9O3H|1|2A|C|45
*
9O3H|1|2A|G|179
9O3H|1|2A|G|180
9O3H|1|2A|A|181
9O3H|1|2A|A|182
9O3H|1|2A|C|183
*
9O3H|1|2A|G|214
9O3H|1|2A|G|215
9O3H|1|2A|A|216
9O3H|1|2A|G|217
9O3H|1|2A|A|218
9O3H|1|2A|G|219
9O3H|1|2A|G|220
9O3H|1|2A|A|221
9O3H|1|2A|A|222
9O3H|1|2A|A|223
9O3H|1|2A|G|224
*
9O3H|1|2A|C|231
9O3H|1|2A|G|232
9O3H|1|2A|A|233
9O3H|1|2A|C|234
9O3H|1|2A|U|235
*
9O3H|1|2A|A|262
9O3H|1|2A|C|263
9O3H|1|2A|C|264
9O3H|1|2A|A|265
9O3H|1|2A|G|266
*
9O3H|1|2A|C|426
9O3H|1|2A|U|427
9O3H|1|2A|A|428
9O3H|1|2A|A|429
9O3H|1|2A|G|430
9O3H|1|2A|U|431
9O3H|1|2A|A|432
9O3H|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34