J6_9O3K_001

3D structure

PDB id

9O3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

9O3K|1|1A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3K|1|1A|G|44
9O3K|1|1A|C|45
*
9O3K|1|1A|G|179
9O3K|1|1A|G|180
9O3K|1|1A|A|181
9O3K|1|1A|A|182
9O3K|1|1A|C|183
*
9O3K|1|1A|G|214
9O3K|1|1A|G|215
9O3K|1|1A|A|216
9O3K|1|1A|G|217
9O3K|1|1A|A|218
9O3K|1|1A|G|219
9O3K|1|1A|G|220
9O3K|1|1A|A|221
9O3K|1|1A|A|222
9O3K|1|1A|A|223
9O3K|1|1A|G|224
*
9O3K|1|1A|C|231
9O3K|1|1A|G|232
9O3K|1|1A|A|233
9O3K|1|1A|C|234
9O3K|1|1A|U|235
*
9O3K|1|1A|A|262
9O3K|1|1A|C|263
9O3K|1|1A|C|264
9O3K|1|1A|A|265
9O3K|1|1A|G|266
*
9O3K|1|1A|C|426
9O3K|1|1A|U|427
9O3K|1|1A|A|428
9O3K|1|1A|A|429
9O3K|1|1A|G|430
9O3K|1|1A|U|431
9O3K|1|1A|A|432
9O3K|1|1A|C|433

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 17

50S ribosomal protein L34