J6_9O3L_003

3D structure

PDB id

9O3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

9O3L|1|2A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3L|1|2A|G|44
9O3L|1|2A|C|45
*
9O3L|1|2A|G|179
9O3L|1|2A|G|180
9O3L|1|2A|A|181
9O3L|1|2A|A|182
9O3L|1|2A|C|183
*
9O3L|1|2A|G|214
9O3L|1|2A|G|215
9O3L|1|2A|A|216
9O3L|1|2A|G|217
9O3L|1|2A|A|218
9O3L|1|2A|G|219
9O3L|1|2A|G|220
9O3L|1|2A|A|221
9O3L|1|2A|A|222
9O3L|1|2A|A|223
9O3L|1|2A|G|224
*
9O3L|1|2A|C|231
9O3L|1|2A|G|232
9O3L|1|2A|A|233
9O3L|1|2A|C|234
9O3L|1|2A|U|235
*
9O3L|1|2A|A|262
9O3L|1|2A|C|263
9O3L|1|2A|C|264
9O3L|1|2A|A|265
9O3L|1|2A|G|266
*
9O3L|1|2A|C|426
9O3L|1|2A|U|427
9O3L|1|2A|A|428
9O3L|1|2A|A|429
9O3L|1|2A|G|430
9O3L|1|2A|U|431
9O3L|1|2A|A|432
9O3L|1|2A|C|433

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34