J6_9OV3_001

3D structure

PDB id

9OV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme

Experimental method

ELECTRON MICROSCOPY

Resolution

3.19 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9OV3|1|A|U|52, 9OV3|1|A|A|256, 9OV3|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OV3|1|A|C|21
9OV3|1|A|G|22
9OV3|1|A|C|23
*
9OV3|1|A|G|44
9OV3|1|A|A|45
9OV3|1|A|G|46
9OV3|1|A|G|47
9OV3|1|A|A|48
9OV3|1|A|A|49
9OV3|1|A|A|50
9OV3|1|A|G|51
9OV3|1|A|U|52
9OV3|1|A|C|53
9OV3|1|A|C|54
9OV3|1|A|A|55
9OV3|1|A|U|56
9OV3|1|A|G|57
9OV3|1|A|C|58
*
9OV3|1|A|G|254
9OV3|1|A|A|255
9OV3|1|A|A|256
9OV3|1|A|A|257
9OV3|1|A|C|258
*
9OV3|1|A|G|274
9OV3|1|A|G|275
9OV3|1|A|C|276
9OV3|1|A|A|277
9OV3|1|A|C|278
*
9OV3|1|A|G|307
9OV3|1|A|A|308
*
9OV3|1|A|U|329
9OV3|1|A|A|330
9OV3|1|A|G|331
9OV3|1|A|A|332
9OV3|1|A|U|333
9OV3|1|A|A|334
9OV3|1|A|G|335
9OV3|1|A|A|336
9OV3|1|A|U|337
9OV3|1|A|G|338

Current chains

Chain A

RNase P RNA component

Nearby chains