J6_9OV7_001

3D structure

PDB id

9OV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.27 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

9OV7|1|A|U|52, 9OV7|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OV7|1|A|C|21
9OV7|1|A|G|22
9OV7|1|A|C|23
*
9OV7|1|A|G|44
9OV7|1|A|A|45
9OV7|1|A|G|46
9OV7|1|A|G|47
9OV7|1|A|A|48
9OV7|1|A|A|49
9OV7|1|A|A|50
9OV7|1|A|G|51
9OV7|1|A|U|52
9OV7|1|A|C|53
9OV7|1|A|C|54
9OV7|1|A|A|55
9OV7|1|A|U|56
9OV7|1|A|G|57
9OV7|1|A|C|58
*
9OV7|1|A|G|254
9OV7|1|A|A|255
9OV7|1|A|A|256
9OV7|1|A|A|257
9OV7|1|A|C|258
*
9OV7|1|A|G|274
9OV7|1|A|G|275
9OV7|1|A|C|276
9OV7|1|A|A|277
9OV7|1|A|C|278
*
9OV7|1|A|G|307
9OV7|1|A|A|308
*
9OV7|1|A|U|329
9OV7|1|A|A|330
9OV7|1|A|G|331
9OV7|1|A|A|332
9OV7|1|A|U|333
9OV7|1|A|A|334
9OV7|1|A|G|335
9OV7|1|A|A|336
9OV7|1|A|U|337
9OV7|1|A|G|338

Current chains

Chain A

RNase P ribozyme

Nearby chains