J6_9OWK_001

3D structure

PDB id

9OWK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 10 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OWK|1|A|U|52, 9OWK|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWK|1|A|C|21
9OWK|1|A|G|22
9OWK|1|A|C|23
*
9OWK|1|A|G|44
9OWK|1|A|A|45
9OWK|1|A|G|46
9OWK|1|A|G|47
9OWK|1|A|A|48
9OWK|1|A|A|49
9OWK|1|A|A|50
9OWK|1|A|G|51
9OWK|1|A|U|52
9OWK|1|A|C|53
9OWK|1|A|C|54
9OWK|1|A|A|55
9OWK|1|A|U|56
9OWK|1|A|G|57
9OWK|1|A|C|58
*
9OWK|1|A|G|254
9OWK|1|A|A|255
9OWK|1|A|A|256
9OWK|1|A|A|257
9OWK|1|A|C|258
*
9OWK|1|A|G|274
9OWK|1|A|G|275
9OWK|1|A|C|276
9OWK|1|A|A|277
9OWK|1|A|C|278
*
9OWK|1|A|G|307
9OWK|1|A|A|308
9OWK|1|A|C|309
*
9OWK|1|A|G|328
9OWK|1|A|U|329
9OWK|1|A|A|330
9OWK|1|A|G|331
9OWK|1|A|A|332
9OWK|1|A|U|333
9OWK|1|A|A|334
9OWK|1|A|G|335
9OWK|1|A|A|336
9OWK|1|A|U|337
9OWK|1|A|G|338

Current chains

Chain A

RNase P RNA component

Nearby chains

Chain C

Transfer RNA; tRNA

Chain E

Transfer RNA; tRNA