J6_9OWM_001

3D structure

PDB id

9OWM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with mature tRNA in 10 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OWM|1|A|U|52, 9OWM|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWM|1|A|C|21
9OWM|1|A|G|22
9OWM|1|A|C|23
*
9OWM|1|A|G|44
9OWM|1|A|A|45
9OWM|1|A|G|46
9OWM|1|A|G|47
9OWM|1|A|A|48
9OWM|1|A|A|49
9OWM|1|A|A|50
9OWM|1|A|G|51
9OWM|1|A|U|52
9OWM|1|A|C|53
9OWM|1|A|C|54
9OWM|1|A|A|55
9OWM|1|A|U|56
9OWM|1|A|G|57
9OWM|1|A|C|58
*
9OWM|1|A|G|254
9OWM|1|A|A|255
9OWM|1|A|A|256
9OWM|1|A|A|257
9OWM|1|A|C|258
*
9OWM|1|A|G|274
9OWM|1|A|G|275
9OWM|1|A|C|276
9OWM|1|A|A|277
9OWM|1|A|C|278
*
9OWM|1|A|G|307
9OWM|1|A|A|308
9OWM|1|A|C|309
*
9OWM|1|A|G|328
9OWM|1|A|U|329
9OWM|1|A|A|330
9OWM|1|A|G|331
9OWM|1|A|A|332
9OWM|1|A|U|333
9OWM|1|A|A|334
9OWM|1|A|G|335
9OWM|1|A|A|336
9OWM|1|A|U|337
9OWM|1|A|G|338

Current chains

Chain A

RNase P RNA component

Nearby chains

Chain C

Transfer RNA; tRNA