J6_9OWN_001

3D structure

PDB id

9OWN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (Consensus)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OWN|1|A|U|52, 9OWN|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWN|1|A|C|21
9OWN|1|A|G|22
9OWN|1|A|C|23
*
9OWN|1|A|G|44
9OWN|1|A|A|45
9OWN|1|A|G|46
9OWN|1|A|G|47
9OWN|1|A|A|48
9OWN|1|A|A|49
9OWN|1|A|A|50
9OWN|1|A|G|51
9OWN|1|A|U|52
9OWN|1|A|C|53
9OWN|1|A|C|54
9OWN|1|A|A|55
9OWN|1|A|U|56
9OWN|1|A|G|57
9OWN|1|A|C|58
*
9OWN|1|A|G|254
9OWN|1|A|A|255
9OWN|1|A|A|256
9OWN|1|A|A|257
9OWN|1|A|C|258
*
9OWN|1|A|G|274
9OWN|1|A|G|275
9OWN|1|A|C|276
9OWN|1|A|A|277
9OWN|1|A|C|278
*
9OWN|1|A|G|307
9OWN|1|A|A|308
9OWN|1|A|C|309
*
9OWN|1|A|G|328
9OWN|1|A|U|329
9OWN|1|A|A|330
9OWN|1|A|G|331
9OWN|1|A|A|332
9OWN|1|A|U|333
9OWN|1|A|A|334
9OWN|1|A|G|335
9OWN|1|A|A|336
9OWN|1|A|U|337
9OWN|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain C

Transfer RNA; tRNA