J6_9OWT_001

3D structure

PDB id

9OWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OWT|1|A|U|52, 9OWT|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWT|1|A|C|21
9OWT|1|A|G|22
9OWT|1|A|C|23
*
9OWT|1|A|G|44
9OWT|1|A|A|45
9OWT|1|A|G|46
9OWT|1|A|G|47
9OWT|1|A|A|48
9OWT|1|A|A|49
9OWT|1|A|A|50
9OWT|1|A|G|51
9OWT|1|A|U|52
9OWT|1|A|C|53
9OWT|1|A|C|54
9OWT|1|A|A|55
9OWT|1|A|U|56
9OWT|1|A|G|57
9OWT|1|A|C|58
*
9OWT|1|A|G|254
9OWT|1|A|A|255
9OWT|1|A|A|256
9OWT|1|A|A|257
9OWT|1|A|C|258
*
9OWT|1|A|G|274
9OWT|1|A|G|275
9OWT|1|A|C|276
9OWT|1|A|A|277
9OWT|1|A|C|278
*
9OWT|1|A|G|307
9OWT|1|A|A|308
9OWT|1|A|C|309
*
9OWT|1|A|G|328
9OWT|1|A|U|329
9OWT|1|A|A|330
9OWT|1|A|G|331
9OWT|1|A|A|332
9OWT|1|A|U|333
9OWT|1|A|A|334
9OWT|1|A|G|335
9OWT|1|A|A|336
9OWT|1|A|U|337
9OWT|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component

Chain C

Transfer RNA; tRNA