J6_9OWV_001

3D structure

PDB id

9OWV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with mature tRNA in 5 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OWV|1|A|U|52, 9OWV|1|A|A|256, 9OWV|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWV|1|A|C|21
9OWV|1|A|G|22
9OWV|1|A|C|23
*
9OWV|1|A|G|44
9OWV|1|A|A|45
9OWV|1|A|G|46
9OWV|1|A|G|47
9OWV|1|A|A|48
9OWV|1|A|A|49
9OWV|1|A|A|50
9OWV|1|A|G|51
9OWV|1|A|U|52
9OWV|1|A|C|53
9OWV|1|A|C|54
9OWV|1|A|A|55
9OWV|1|A|U|56
9OWV|1|A|G|57
9OWV|1|A|C|58
*
9OWV|1|A|G|254
9OWV|1|A|A|255
9OWV|1|A|A|256
9OWV|1|A|A|257
9OWV|1|A|C|258
*
9OWV|1|A|G|274
9OWV|1|A|G|275
9OWV|1|A|C|276
9OWV|1|A|A|277
9OWV|1|A|C|278
*
9OWV|1|A|G|307
9OWV|1|A|A|308
9OWV|1|A|C|309
*
9OWV|1|A|G|328
9OWV|1|A|U|329
9OWV|1|A|A|330
9OWV|1|A|G|331
9OWV|1|A|A|332
9OWV|1|A|U|333
9OWV|1|A|A|334
9OWV|1|A|G|335
9OWV|1|A|A|336
9OWV|1|A|U|337
9OWV|1|A|G|338

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains

Chain B

Ribonuclease P protein component

Chain C

Transfer RNA; tRNA