J6_9OY2_001

3D structure

PDB id

9OY2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OY2|1|A|U|52, 9OY2|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OY2|1|A|C|21
9OY2|1|A|G|22
9OY2|1|A|C|23
*
9OY2|1|A|G|44
9OY2|1|A|A|45
9OY2|1|A|G|46
9OY2|1|A|G|47
9OY2|1|A|A|48
9OY2|1|A|A|49
9OY2|1|A|A|50
9OY2|1|A|G|51
9OY2|1|A|U|52
9OY2|1|A|C|53
9OY2|1|A|C|54
9OY2|1|A|A|55
9OY2|1|A|U|56
9OY2|1|A|G|57
9OY2|1|A|C|58
*
9OY2|1|A|G|254
9OY2|1|A|A|255
9OY2|1|A|A|256
9OY2|1|A|A|257
9OY2|1|A|C|258
*
9OY2|1|A|G|274
9OY2|1|A|G|275
9OY2|1|A|C|276
9OY2|1|A|A|277
9OY2|1|A|C|278
*
9OY2|1|A|G|307
9OY2|1|A|A|308
9OY2|1|A|C|309
*
9OY2|1|A|G|328
9OY2|1|A|U|329
9OY2|1|A|A|330
9OY2|1|A|G|331
9OY2|1|A|A|332
9OY2|1|A|U|333
9OY2|1|A|A|334
9OY2|1|A|G|335
9OY2|1|A|A|336
9OY2|1|A|U|337
9OY2|1|A|G|338

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains