J6_9OY3_001

3D structure

PDB id

9OY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OY3|1|A|U|52, 9OY3|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OY3|1|A|C|21
9OY3|1|A|G|22
9OY3|1|A|C|23
*
9OY3|1|A|G|44
9OY3|1|A|A|45
9OY3|1|A|G|46
9OY3|1|A|G|47
9OY3|1|A|A|48
9OY3|1|A|A|49
9OY3|1|A|A|50
9OY3|1|A|G|51
9OY3|1|A|U|52
9OY3|1|A|C|53
9OY3|1|A|C|54
9OY3|1|A|A|55
9OY3|1|A|U|56
9OY3|1|A|G|57
9OY3|1|A|C|58
*
9OY3|1|A|G|254
9OY3|1|A|A|255
9OY3|1|A|A|256
9OY3|1|A|A|257
9OY3|1|A|C|258
*
9OY3|1|A|G|274
9OY3|1|A|G|275
9OY3|1|A|C|276
9OY3|1|A|A|277
9OY3|1|A|C|278
*
9OY3|1|A|G|307
9OY3|1|A|A|308
9OY3|1|A|C|309
*
9OY3|1|A|G|328
9OY3|1|A|U|329
9OY3|1|A|A|330
9OY3|1|A|G|331
9OY3|1|A|A|332
9OY3|1|A|U|333
9OY3|1|A|A|334
9OY3|1|A|G|335
9OY3|1|A|A|336
9OY3|1|A|U|337
9OY3|1|A|G|338

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains