J6_9OY4_001

3D structure

PDB id

9OY4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9OY4|1|A|U|52, 9OY4|1|A|A|256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OY4|1|A|C|21
9OY4|1|A|G|22
9OY4|1|A|C|23
*
9OY4|1|A|G|44
9OY4|1|A|A|45
9OY4|1|A|G|46
9OY4|1|A|G|47
9OY4|1|A|A|48
9OY4|1|A|A|49
9OY4|1|A|A|50
9OY4|1|A|G|51
9OY4|1|A|U|52
9OY4|1|A|C|53
9OY4|1|A|C|54
9OY4|1|A|A|55
9OY4|1|A|U|56
9OY4|1|A|G|57
9OY4|1|A|C|58
*
9OY4|1|A|G|254
9OY4|1|A|A|255
9OY4|1|A|A|256
9OY4|1|A|A|257
9OY4|1|A|C|258
*
9OY4|1|A|G|274
9OY4|1|A|G|275
9OY4|1|A|C|276
9OY4|1|A|A|277
9OY4|1|A|C|278
*
9OY4|1|A|G|307
9OY4|1|A|A|308
9OY4|1|A|C|309
*
9OY4|1|A|G|328
9OY4|1|A|U|329
9OY4|1|A|A|330
9OY4|1|A|G|331
9OY4|1|A|A|332
9OY4|1|A|U|333
9OY4|1|A|A|334
9OY4|1|A|G|335
9OY4|1|A|A|336
9OY4|1|A|U|337
9OY4|1|A|G|338

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains