J6_9PJ8_001
3D structure
- PDB id
- 9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Sarecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GC*GUAAC*GGAAGAGAAAA*UGAUU*AGGAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 9PJ8|1|a|A|230
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PJ8|1|a|G|44
9PJ8|1|a|C|45
*
9PJ8|1|a|G|186
9PJ8|1|a|U|187
9PJ8|1|a|A|188
9PJ8|1|a|A|189
9PJ8|1|a|C|190
*
9PJ8|1|a|G|221
9PJ8|1|a|G|222
9PJ8|1|a|A|223
9PJ8|1|a|A|224
9PJ8|1|a|G|225
9PJ8|1|a|A|226
9PJ8|1|a|G|227
9PJ8|1|a|A|228
9PJ8|1|a|A|229
9PJ8|1|a|A|230
9PJ8|1|a|A|231
*
9PJ8|1|a|U|238
9PJ8|1|a|G|239
9PJ8|1|a|A|240
9PJ8|1|a|U|241
9PJ8|1|a|U|242
*
9PJ8|1|a|A|269
9PJ8|1|a|G|270
9PJ8|1|a|G|271
9PJ8|1|a|A|272
9PJ8|1|a|G|273
*
9PJ8|1|a|C|515
9PJ8|1|a|U|516
9PJ8|1|a|A|517
9PJ8|1|a|A|518
9PJ8|1|a|A|519
9PJ8|1|a|U|520
9PJ8|1|a|A|521
9PJ8|1|a|C|522
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
Coloring options: