J6_9PSM_002
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UUUA*UUCG*CU*AGCA*UCAAUUGAUCC*GACCAACGGAACAA
- Length
- 39 nucleotides
- Bulged bases
- 9PSM|1|A|U|2739, 9PSM|1|A|U|2895, 9PSM|1|A|G|2916, 9PSM|1|A|A|2918
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSM|1|A|U|2737
9PSM|1|A|U|2738
9PSM|1|A|U|2739
9PSM|1|A|A|2740
*
9PSM|1|A|U|2807
9PSM|1|A|U|2808
9PSM|1|A|C|2809
9PSM|1|A|G|2810
*
9PSM|1|A|C|2822
9PSM|1|A|U|2823
*
9PSM|1|A|A|2845
9PSM|1|A|G|2846
9PSM|1|A|C|2847
9PSM|1|A|A|2848
*
9PSM|1|A|U|2890
9PSM|1|A|C|2891
9PSM|1|A|A|2892
9PSM|1|A|A|2893
9PSM|1|A|U|2894
9PSM|1|A|U|2895
9PSM|1|A|G|2896
9PSM|1|A|A|2897
9PSM|1|A|U|2898
9PSM|1|A|C|2899
9PSM|1|A|C|2900
*
9PSM|1|A|G|2909
9PSM|1|A|A|2910
9PSM|1|A|C|2911
9PSM|1|A|C|2912
9PSM|1|A|A|2913
9PSM|1|A|A|2914
9PSM|1|A|C|2915
9PSM|1|A|G|2916
9PSM|1|A|G|2917
9PSM|1|A|A|2918
9PSM|1|A|A|2919
9PSM|1|A|C|2920
9PSM|1|A|A|2921
9PSM|1|A|A|2922
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain Ax
- Transfer RNA; tRNA
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
Coloring options: