J6_9QZP_001
3D structure
- PDB id
- 9QZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome Classical Pre translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 9QZP|1|A2|A|66, 9QZP|1|C2|U|34
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QZP|1|A2|G|21
9QZP|1|A2|G|22
9QZP|1|A2|C|23
9QZP|1|A2|G|24
9QZP|1|A2|A|25
9QZP|1|A2|C|26
*
9QZP|1|A2|G|57
9QZP|1|A2|G|58
9QZP|1|A2|A|59
9QZP|1|A2|A|60
9QZP|1|A2|A|61
9QZP|1|A2|A|62
9QZP|1|A2|G|63
9QZP|1|A2|A|64
9QZP|1|A2|A|65
9QZP|1|A2|A|66
9QZP|1|A2|C|67
*
9QZP|1|A2|G|74
9QZP|1|A2|G|75
9QZP|1|A2|A|76
9QZP|1|A2|U|77
9QZP|1|A2|U|78
*
9QZP|1|A2|A|105
9QZP|1|A2|A|106
9QZP|1|A2|G|107
9QZP|1|A2|A|108
9QZP|1|A2|G|109
*
9QZP|1|A2|C|332
9QZP|1|A2|U|333
9QZP|1|A2|A|334
9QZP|1|A2|A|335
9QZP|1|A2|A|336
9QZP|1|A2|U|337
9QZP|1|A2|A|338
9QZP|1|A2|C|339
*
9QZP|1|C2|G|33
9QZP|1|C2|U|34
9QZP|1|C2|C|35
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain F1
- Large ribosomal subunit protein eL13
- Chain H1
- Large ribosomal subunit protein eL15
- Chain b2
- Large ribosomal subunit protein uL29
- Chain c2
- Large ribosomal subunit protein eL36
- Chain d2
- Large ribosomal subunit protein eL37
Coloring options: