3D structure

PDB id
9RBF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.44 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
9RBF|1|a|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RBF|1|a|G|45
9RBF|1|a|G|46
*
9RBF|1|a|C|179
9RBF|1|a|G|180
9RBF|1|a|A|181
9RBF|1|a|A|182
9RBF|1|a|C|183
*
9RBF|1|a|G|214
9RBF|1|a|G|215
9RBF|1|a|A|216
9RBF|1|a|A|217
9RBF|1|a|A|218
9RBF|1|a|A|219
9RBF|1|a|G|220
9RBF|1|a|A|221
9RBF|1|a|A|222
9RBF|1|a|A|223
9RBF|1|a|U|224
*
9RBF|1|a|A|231
9RBF|1|a|G|232
9RBF|1|a|A|233
9RBF|1|a|U|234
9RBF|1|a|U|235
*
9RBF|1|a|A|262
9RBF|1|a|G|263
9RBF|1|a|C|264
9RBF|1|a|A|265
9RBF|1|a|G|266
*
9RBF|1|a|C|426
9RBF|1|a|U|427
9RBF|1|a|A|428
9RBF|1|a|A|429
9RBF|1|a|A|430
9RBF|1|a|U|431
9RBF|1|a|A|432
9RBF|1|a|C|433

Current chains

Chain a
23S rRNA

Nearby chains

Chain 1
Large ribosomal subunit protein bL34

Coloring options:

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